關於「HISAT2 citation」標籤，搜尋引擎有相關的訊息討論：

HISAT2 graph-based alignment of next generation sequencing ...。

HISAT2 is a fast and sensitive alignment program for mapping ... DNA and RNA) to a population of human genomes as well as to a single reference genome.： 。

HISAT - Center for Computational Biology。

HISAT is a fast and sensitive spliced alignment program for mapping RNA-seq reads. In addition to one global FM index that represents a whole genome, ...： 。

Graph-based genome alignment and genotyping with HISAT2 and ...。

We use HISAT2 to represent and search an expanded model of the human reference genome in which over 14.5 million genomic variants in ...： tw | tw。

HISAT: a fast spliced aligner with low memory requirements - NCBI。

RNA-seq analysis begins by aligning reads against a reference genome to determine the location from which the reads originated a step that has ...： 。

Elimination of reference mapping bias reveals robust immune ...。

2019年7月12日 · The remapping was carried out using HISAT2 (Kim et al., 2015) in combination with SAMtools (Li et al., 2009). The Genome Analysis Toolkit v 3.8 ...。

Assembly and analysis of a qingke reference genome demonstrate ...。

2017年9月4日 · The availability of its reference genome sequences could be useful ... the genomes of Morex and Zangqing320 using Hisat2 v2.0.4 (Kim et al., ...。

Alleviating reference bias through personalized RNA-seq alignment。

2018年8月10日 · Existing algorithms that utilize a standard reference genome as a ... iMapSplice-phased and HISAT2 POP are not applicable since the SNP data ...。

HSRA: Hadoop-based spliced read aligner for RNA sequencing data。

2018年7月31日 · In RNA-seq experiments, the mapping of short reads to a reference ... To do so, HSRA integrates the fast spliced aligner HISAT2 into Hadoop.。

Cloud accelerated alignment and assembly of full-length single-cell ...。

2019年12月30日 · However, there are limitations with using reference annotation as we are ... The alignment tool - STAR or HISAT2 - is then executed using ...。

nf-core/rnaseq: RNA sequencing analysis pipeline using ... - GitHub。

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with ... GitHub Actions CI Status GitHub Actions Linting Status AWS CI Cite with Zenodo.：